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by Tim Stevens last modified 2007-02-05 16:17
Contributors: wvranken

Related sites external to CCPN

Useful links:

    Organisations, facilities, ...

Grid Computing

A theme issue of Philosophical Transactions of the Royal Society

BioMagResBank

The database for macromolecular NMR results.

Bruker

NMR Spectrometers - hardware, software, ...

Cambridge 800MHz Facility

UK NMR facility.

CCP4

UK Collaborative Computing Project 4 for X-ray crystallography. Our role model.

CCPB UK Collaborative Computing Project for Biomolecular Simulation, with which we will hopefully collaborate on the development of packages for molecular simulation.

EBI - MSD

European Bioinformatics Institute Macromolecular Structure Database. PDB deposition ...

EUROCARB-DB
A European project to handle the informatics of carbohydrates. The NMR part of it uses CCPN.

Florence CERM NMR facility

EU large scale NMR facility. NMR of (paramagnetic) metalloproteins.

Frankfurt UNIFRA NMR facility

EU large scale NMR facility. NMR and EPR.

JEOL

NMR Spectrometers - hardware, software, ...

RCSB/PDB

The Protein Data Bank.

SpectroscopyNow

Contains lots of resources - links, job ads, ... (owned by Wiley)

Utrecht SON NMR facility

EU large-scale NMR facility

Varian

NMR Spectrometers - hardware, software, ...

 

Software working with the CCP data model:

    This should be a comprehensive list of NMR software that is integrated with the CCP data model.
    If you think your software should be in this list, please
    contact us.
    For groups collaborating with CCPN on integrating their software, see
    Collaborations.

CcpNmr suite

Our own contribution

    Note that most comon NMR data formats can be converted to and from the CCP data model
    through the CcpNmr DataManager and DataConverter.
     

 

Other NMR software:

    A very partial list

ANSIG

Interactive NMR analysis program

AQUA

NMR structure validation

ARIA

NMR structure generation, including NOE assignment

AutoAssign

Expert system for automatic backbone resonance assignment

AZARA

NMR processing

CYANA

NMR structure generation, including NOE assignment

GIFA

NMR processing and assignment

MARDIGRAS

Relaxation matrix calculation of distances from NOE intensities

NMRPipe/NMRD raw

NMR processing

NMRView

Interactive NMR analysis program

PIPP/CAPP/STA PP

NMR peak picking and assignment

Pronto

Interactive NMR analysis program

SPARKY

Interactive NMR assignment program

SPINS

Spectra-to-de[position NMR program. Uses a single database.

TALOS

Phi,psi constraints from chemical shifts.

XEASY

Interactive NMR assignment program


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